Purpose
Expression of human codon-optimized dCas9-DNMT3A fusion with T2A-PuroR for targeted DNA methylation in mammalian cells; cloning backbone for sgRNA
Backbone
Vector backbone:PX462
Backbone size w/o insert (bp):4246
Total vector size (bp):10152
Vector type:Mammalian Expression, CRISPR
Growth in Bacteria
Bacterial Resistance(s):Ampicillin, 100 μg/mL
Growth Temperature:37℃
Growth Strain(s):DH5alpha
Copy number:Unknown
Gene/Insert
Gene/Insert name:S. pyogenes dCas9 fused with the catalytic domain of human DNMT3A (amino acids P602-V912) and T2A-PuroR
Alt name:dCas9-DNMT3A-PuroR
Alt name:SpdCas9-DNMT3A-T2A-PuroR
Alt name:dCas9-DNMT3A
Species:H. sapiens (human), Synthetic; S. pyogenes
Insert Size (bp):5906
Mutation:D10A and H840A in S.pyogenes Cas9
GenBank ID:AKA60242.1 NP_072046.2
Entrez Gene:DNMT3A (a.k.a. DNMT3A2, HESJAS, M.HsaIIIA, TBRS)
Promoter:CBh
Tags/ Fusion Proteins:
3xFLAG (N terminal on insert)
SV40 NLS (N terminal on insert)
T2A-PuroR (C terminal on insert)
Cloning Information
Cloning method:Restriction Enzyme
5′ cloning site:BamHI (not destroyed)
3′ cloning site:FseI (not destroyed)
5′ sequencing primer:GS-linker For 5' GAAGAGGTACACCAGCACCAAAG 3'
3′ sequencing primer:BGH Rev